Summer School in Conservation Genetics of Marine Organisms (Chioggia, 3-9 July 2011)

Software Download Section

Links to the programs you have to download for the practice session on data analysis

• GeneMaker 1.97Demo (registration required)
• Mega 5 (registration required)
• Genetix 4.05
• Arlequin 3.5
• Structure 2.3.3
• Convert 1.31
• R 2.11.0

Input Files Download Section

Input files for the practice session on data analysis

• Wednesday afternoon session
• MICROSATELLITES DATASET (MonkSeal.txt) see below Pastor et al 2007
• mtDNA DATASET (hippocampus_ingens_aln.fas) (hippocampus_ingens_aln.arp) see below Saarman et al 2010

• Thursday afternoon session
• MICROSATELLITES DATASET (DeepFish.txt) see below White et al 2009
• mtDNA DATASET (sardina_aln.fas) (sardina_aln_fin.arp) see below Atarhouch et al 2006

• Thursday afternoon advanced session
• mtDNA NEXUS DATASET (sardina_aln_beast.nex) see below Atarhouch et al 2006

Papers Download Section

Research articles related to Major Themes and the Software Sessions

• M1
• Pastor et al. 2007, Animal Conservation
• Steeb et al, 2007, Fisheries
• Garza et al, 2007, Submitted
• M2
• Alacs et al, 2010, FSMP
• Filonz et al, 2010, FRI
• Stonkhead, 2010, Science
• M3
• Alter et al, 2007, PNAS
• Fraser et al, 2007, MolEcol
• Natoli et al, 2005, PRS
• Palsboll et al, 1997, Nature
• Hauser et al, 2002, PNAS
• M4
• Hoffmann&Sgro, 2011, Nature
• Sgro et al, 2011, EvolApp
• Weeks et al., 2011, EvolApp
• M5
• Famà et al, 2000, Eur J Phycol
• Meusnier et al, 2002, MolEcol
• Roman&Darling, 2007, Tree
• M6
• van Oosterhout et al, 2007 Cons Biol
• van Oosterhout et al, 2007 Cons Biol (erratum)
• Software Sessions
• Atarhouch et al, 2006, MPE
• Pastor et al, 2007, Anim Cons
• Saarman et al, 2010, Cons Genet
• White et al, 2009, MolEcol
• Reviews
• DeSalle&Amato, 2004, Nature Reviews Genetics
• Allendorf et al, 2010, Nature Reviews Genetics